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A graph approach to the threshold all-against-all substring matching problem

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Publication:5269280
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DOI10.1145/1227161.1370601zbMATH Open1365.68504OpenAlexW2086354937MaRDI QIDQ5269280FDOQ5269280

Ulrike Stege, Alex Thomo, Chris Upton, Marina Barsky

Publication date: 15 June 2017

Published in: ACM Journal of Experimental Algorithmics (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1145/1227161.1370601



zbMATH Keywords

complexitybioinformaticsstring matching


Mathematics Subject Classification ID

Protein sequences, DNA sequences (92D20) Analysis of algorithms (68W40) Algorithms on strings (68W32)








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