A process model of actin polymerisation

DOI10.1016/J.ENTCS.2009.02.009MaRDI QIDQ5404079zbMATH OpenOpenAlexDBLPWikidataFDO

Authors Luca Cardelli, Emmanuelle Caron, Philippa Gardner, Ozan Kahramanoğulları, Andrew Phillips

Publication date 21 March 2014

Published in Electronic Notes in Theoretical Computer Science (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/j.entcs.2009.02.009

zbMATH Keywords

actinprocess modellingstochastic \(\pi\)-calculusgeometric plotting

Mathematics Subject Classification ID

Biomechanics (92C10) Kinetics in biochemical problems (pharmacokinetics, enzyme kinetics, etc.) (92C45) Models and methods for concurrent and distributed computing (process algebras, bisimulation, transition nets, etc.) (68Q85)

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Cites work

• scientific article; zbMATH DE number 48028 (Why is no real title available?)
• A process model of rho GTP-binding proteins in the context of phagocytosis
• A spatial extension to the \(\pi\) calculus
• A theoretical approach to actin filament dynamics
• Abstract Interpretation of Cellular Signalling Networks
• Application of a stochastic name-passing calculus to representation and simulation of molecular processes
• Formal molecular biology
• On the Computational Power of Biochemistry
• Rule-Based Modelling of Cellular Signalling

Cited in

(12)

• A continuum model for the growth of dendritic actin networks
• Models for actin polymerization motors
• A phosphoinositide-based model of Actin waves in frustrated phagocytosis
• Connecting actin polymer dynamics across multiple scales
• The role of mode switching in a population of actin polymers with constraints
• Mathematical modelling and numerical simulations of actin dynamics in the eukaryotic cell
• A process model of Rho GTP-binding proteins
• Process calculi for biological processes
• Models for the length of actin filaments. II: Polymerization and fragmentation by gelsolin acting together.
• A theoretical analysis of filament length fluctuations in actin and other polymers
• Modelling patterns of gene regulation in the bond-calculus
• Coarse-graining the dynamics of ideal branched polymers

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