Enumeration of viral capsid assembly pathways: tree orbits under permutation group action

DOI10.1007/S11538-010-9606-4zbMATH Open1214.92019OpenAlexW2023444347WikidataQ48164752 ScholiaQ48164752MaRDI QIDQ542011FDOQ542011

Miklós Bóna, Andrew Vince, Meera Sitharam

Publication date: 8 June 2011

Published in: Bulletin of Mathematical Biology (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1007/s11538-010-9606-4

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zbMATH Keywords

generating functiongroup actiontree enumerationviral capsid assembly

Mathematics Subject Classification ID

Applications of graph theory (05C90) Biochemistry, molecular biology (92C40) Trees (05C05) Combinatorial properties of polytopes and polyhedra (number of faces, shortest paths, etc.) (52B05) General theory for finite permutation groups (20B05) Cell biology (92C37) Finite abelian groups (20K01)

Cites Work

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• Optimal algorithms for comparing trees with labeled leaves
• Coloring rules for finite trees, and probabilities of monadic second order sentences
• A logical approach to asymptotic combinatorics. II: Monadic second-order properties
• The influence of symmetry on the probability of assembly pathways for icosahedral viral shells
• Conjugacy classes of the automorphism group of a tree
• Local rule-based theory of virus shell assembly.
• Zigzag Structures of Simple Two-Faced Polyhedra

Cited In (4)

• The influence of symmetry on the probability of assembly pathways for icosahedral viral shells
• Orbits of crystallographic embedding of non-crystallographic groups and applications to virology
• How to build a graph in \(n\) days: some variations of graph assembly
• Algebraic methods in mathematical biology

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