Two-State Dynamics for Replicating Two-Strand Systems

DOI10.1007/S11080-007-9064-0MaRDI QIDQ5437444zbMATH OpenOpenAlexWikidataFDO

Authors Diederik Aerts, Marek Czachor

Publication date 21 January 2008

Published in Open Systems & Information Dynamics (Search for Journal in Brave)

Full work available at URL https://arxiv.org/abs/q-bio/0512048

zbMATH Keywords

mutually time-reflected Turing machines

Mathematics Subject Classification ID

Biochemistry, molecular biology (92C40) Protein sequences, DNA sequences (92D20) Applications of quantum theory to specific physical systems (81V99)

Abstract: We propose a formalism for describing two-strand systems of a DNA type by means of soliton von Neumann equations, and illustrate how it works on a simple example exactly solvably by a Darboux transformation. The main idea behind the construction is the link between solutions of von Neumann equations and entangled states of systems consisting of two subsystems evolving in time in opposite directions. Such a time evolution has analogies in realistic DNA where the polymerazes move on leading and lagging strands in opposite directions.

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Cites work

• scientific article; zbMATH DE number 1754713 (Why is no real title available?)
• Darboux covariant equations of von Neumann type and their generalizations
• Darboux integration of \(i\dot\rho=[H,f(\rho)]\)
• Elementary and binary Darboux transformations at rings
• Intertwine operators and elementary Darboux transforms in differential rings and modules
• Irreversibility and causality. Semigroups and rigged Hilbert spaces. A selection of articles presented at the 21st international colloquium on group theoretical methods in physics (ICGTMP) at Goslar, Germany, July 16--21, 1996. Dedicated to Günther Ludwi
• Lie-Nambu and beyond
• The reduced self-dual Yang–Mills equation, binary and infinitesimal Darboux transformations

Cited in

(6)

• MOLECULAR REPLICATOR DYNAMICS
• Chains of Space-Time Open Systems and DNA
• Spectra of nonlocally bound quantum systems
• Stationary states in nonlocal type dynamics of composite systems
• Calculating two-strand jellyfish relations
• Systems, environments, and soliton rate equations: toward realistic modeling

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