Using Linear Mixed Models for Normalization of cDNA Microarrays

DOI10.2202/1544-6115.1249MaRDI QIDQ5443045zbMATH OpenOpenAlexWikidataFDO

Authors Philippe Haldermans, Ziv Shkedy, Suzy Van Sanden, Tomasz Burzykowski, Marc Aerts

Publication date 18 February 2008

Published in Statistical Applications in Genetics and Molecular Biology (Search for Journal in Brave)

Full work available at URL http://hdl.handle.net/1942/7822, http://www.bepress.com/sagmb/vol6/iss1/art19

Mathematics Subject Classification ID

Linear regression; mixed models (62J05) Applications of statistics to biology and medical sciences; meta analysis (62P10) Biochemistry, molecular biology (92C40) Genetics and epigenetics (92D10)

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(13)

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• Normalization method for transcriptional studies of heterogeneous samples -- simultaneous array normalization and identification of equivalent expression
• A new approach to intensity-dependent normalization of two-channel microarrays
• Analysis of cDNA Microarray Experiment with External Controls : A Mixed Model Approach
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• A Comparison of Parametric and Nonparametric Methods for Normalising cDNA Microarray Data
• Variance component estimation for mixed model analysis of cDNA microarray data
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• A note on joint versus gene-specific mixed model analysis of microarray gene expression data
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• SemiPar

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