Decomposing gene expression into cellular processes

MaRDI QIDQ5456732zbMATH OpenFDO

Authors

Publication date 14 April 2008

Mathematics Subject Classification ID

Classification and discrimination; cluster analysis (statistical aspects) (62H30) Biochemistry, molecular biology (92C40) Genetics and epigenetics (92D10) Computational methods for problems pertaining to biology (92-08)

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(13)

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• Mixed-membership naive Bayes models
• An evolutionary Monte Carlo algorithm for Bayesian block clustering of data matrices
• A data-driven method to learn a jump diffusion process from aggregate biological gene expression data
• Integer matrix approximation and data mining
• Identifying local co-regulation relationships in gene expression data
• Improved biclustering of microarray data demonstrated through systematic performance tests
• Multimodal probabilistic generative models for time-course gene expression data and Gene Ontology (GO) tags
• Bayesian-OverDBC: a Bayesian density-based approach for modeling overlapping clusters
• Model selection strategies for determining the optimal number of overlapping clusters in additive overlapping partitional clustering
• Disentangled representations of cellular identity
• Finding large average submatrices in high dimensional data

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