Estimating the number of conserved segments between species using a chromosome based model

MaRDI QIDQ5457110zbMATH OpenFDO

Authors David Waddington

Publication date 14 April 2008

Mathematics Subject Classification ID

Applications of statistics to biology and medical sciences; meta analysis (62P10) Biochemistry, molecular biology (92C40) Genetics and epigenetics (92D10)

Recommendations

• Comparative Genomics
• Conserved synteny as a measure of genomic distance
• The equilibrium distribution for a generalized Sankoff-Ferretti model accurately predicts chromosome size distributions in a wide variety of species
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Cited in

(5)

• Comparative Genomics
• Syntenies of unrelated genes conserved in mammals and nonvertrebrates (a review)
• Unraveling crucifer genomes through comparative mapping
• Marker density and estimates of chromosome rearrangement
• Accuracy and robustness of analyses based on numbers of genes in observed segments

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