A model for structure and thermodynamics of ssDNA and dsDNA near a surface: A coarse grained approach

DOI10.1016/J.CPC.2010.08.029zbMATH1216.92032OpenAlexW1967870072WikidataQ34200979MaRDI QIDQ549007FDOQ549007

Authors J. Ambia-Garrido, Arnold Vainrub, B. Montgomery Pettitt

Publication date 30 June 2011

Published in Computer Physics Communications (Search for Journal in Brave)

Full work available at URL http://europepmc.org/articles/pmc2955266

zbMATH Keywords

Poisson-Boltzmanncontinuum solvent modelDNA structure

Mathematics Subject Classification ID

Monte Carlo methods (65C05) Biochemistry, molecular biology (92C40)

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Cites work

• The melting mechanism of DNA tethered to a surface

Cited in

(2)

• Coarse-grained molecular dynamics modeling of DNA -- carbon nanotube complexes
• Clamped-end effect on static detection signals of DNA-microcantilever

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