Classification, inference and segmentation of anomalous diffusion with recurrent neural networks

DOI10.1088/1751-8121/AC070AOpenAlexW3171253577MaRDI QIDQ5874039FDOQ5874039

Authors: Aykut Argun, Giovanni Volpe, Stefano Bo 

Publication date: 10 February 2023

Published in: Journal of Physics A: Mathematical and Theoretical (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1088/1751-8121/ac070a

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• Efficient recurrent neural network methods for anomalously diffusing single particle short and noisy trajectories
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zbMATH Keywords

machine learningchange point detectionanomalous diffusionrecurrent neural networksinference and classification

Mathematics Subject Classification ID

Statistical mechanics, structure of matter (82-XX) Quantum theory (81-XX)

Cites Work

• Fractional Brownian Motions, Fractional Noises and Applications
• Optimization methods for large-scale machine learning
• Analysis of short subdiffusive time series: scatter of the time-averaged mean-squared displacement

Cited In (14)

• Efficient recurrent neural network methods for anomalously diffusing single particle short and noisy trajectories
• Neural network-based parameter estimation of stochastic differential equations driven by Lévy noise
• Characterization of anomalous diffusion through convolutional transformers
• Preface: characterisation of physical processes from anomalous diffusion data
• Deep learning-based parameter estimation of stochastic differential equations driven by fractional Brownian motions with measurement noise
• Characterization of anomalous diffusion classical statistics powered by deep learning (CONDOR)
• Classification of stochastic processes by convolutional neural networks
• An empirical method to characterize displacement distribution functions for anomalous and transient diffusion
• Boosting the performance of anomalous diffusion classifiers with the proper choice of features
• Unsupervised learning of anomalous diffusion data: an anomaly detection approach
• Decomposing the effect of anomalous diffusion enables direct calculation of the Hurst exponent and model classification for single random paths
• Extreme learning machine for the characterization of anomalous diffusion from single trajectories (AnDi-ELM)
• Learning physical properties of anomalous random walks using graph neural networks
• WaveNet-based deep neural networks for the characterization of anomalous diffusion (WADNet)

Uses Software

• Keras
• Adam

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