RNA foldings, oriented stuck knots, and state sum invariants

DOI10.1063/5.0140652MaRDI QIDQ5885685zbMATH OpenOpenAlexFDO

Authors Jose Ceniceros, Mohamed Elhamdadi

Publication date 4 April 2023

Published in Journal of Mathematical Physics (Search for Journal in Brave)

Full work available at URL https://arxiv.org/abs/2212.12605

Mathematics Subject Classification ID

Partial differential equations (35-XX) Quantum theory (81-XX)

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Cites work

• A classifying invariant of knots, the knot quandle
• A knot polynomial invariant for analysis of topology of RNA stems and protein disulfide bonds
• Cocycle invariants and oriented singular knots
• Cocycle knot invariants from quandle modules and generalized quandle homology
• DISTRIBUTIVE GROUPOIDS IN KNOT THEORY
• Enhancement of the coloring invariant for folded molecular chains
• Enumeration of spatial 2-bouquet graphs up to flat vertex isotopy
• From racks to pointed Hopf algebras
• Generating sets of Reidemeister moves of oriented singular links and quandles
• scientific article; zbMATH DE number 6490834 (Why is no real title available?)
• scientific article; zbMATH DE number 5082940 (Why is no real title available?)
• Polynomial invariants of singular knots and links
• Quandle cohomology and state-sum invariants of knotted curves and surfaces
• Singquandle shadows and singular knot invariants
• The 2-twist-spun trefoil has the triple point number four
• Twisted quandle homology theory and cocycle knot invariants

Cited in

(8)

• GRAPH INVARIANTS AND THE TOPOLOGY OF RNA FOLDING
• A generalisation of the Kauffman bracket polynomial to determine and analyse structural elements in a RNA secondary structure
• RNA foldings and stuck knots
• RNA foldings, Oriented Stuck Knots and State Sum Invariants
• Generalized quandle polynomials and their applications to stuquandles, stuck links, and RNA folding
• Planar Stick Indices of Some Knotted Graphs
• Stuck knots: rigidity, invariants, and unsticking distance
• Watson-Crick pairing, the Heisenberg group and Milnor invariants

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