Features selection using parametric and non-parametric methods: tag SNPs selection using GA-SVM and GA-KNN

DOI10.17654/ADASMAY2015_105_123zbMATH Open1334.62186OpenAlexW2519446914MaRDI QIDQ5890521FDOQ5890521

Authors: Amr I. A. Elatraby, Rashad R. T. Wahba 

Publication date: 15 March 2016

Published in: Advances and Applications in Statistics (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.17654/adasmay2015_105_123

Recommendations

• CLUSTAG & WCLUSTAG: Hierarchical Clustering Algorithms for Efficient Tag-SNP Selection
• An integer programming approach for the selection of tag SNPs using multi-allelic LD
• SNP selection in genome-wide association studies via penalized support vector machine with MAX test
• Tag SNP selection based on clustering according to dominant sets found using replicator dynamics
• Logic based methods for SNPs tagging and reconstruction

zbMATH Keywords

support vector machine (SVM)genetic algorithm (GA)single nucleotide polymorphisms (SNPs)\(K\)-nearest neighbor (KNN)tag SNPs

Mathematics Subject Classification ID

Applications of statistics to biology and medical sciences; meta analysis (62P10)

Cited In (3)

• Identifying disease related sites based on reliefF and random forest
• SNP selection in genome-wide association studies via penalized support vector machine with MAX test
• Evaluation of statistical tests for ethno-SNP selection

Uses Software

• LIBSVM

This page was built for publication: Features selection using parametric and non-parametric methods: tag SNPs selection using GA-SVM and GA-KNN

Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q5890521)