AFMPB: an adaptive fast multipole Poisson-Boltzmann solver for calculating electrostatics in biomolecular systems

DOI10.1016/J.CPC.2013.05.012MaRDI QIDQ5891015zbMATH OpenOpenAlexFDO

Authors Benzhuo Lu, Xiaolin Cheng, Jingfang Huang, J. Andrew McCammon

Publication date 11 November 2016

Published in Computer Physics Communications (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/j.cpc.2013.05.012

zbMATH Keywords

boundary integral equationdiagonal translationsfast multipole methodsKrylov subspace methodsnode-patch methodPoisson-Boltzmann equation

Mathematics Subject Classification ID

Software, source code, etc. for problems pertaining to optics and electromagnetic theory (78-04) Electro- and magnetostatics (78A30) Biological applications of optics and electromagnetic theory (78A70) Multipole methods applied to problems in optics and electromagnetic theory (78M16)

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(7)

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Describes a project that uses

Uses Software

• AFMPB

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