An empirical Bayes risk prediction model using multiple traits for sequencing data

DOI10.1515/SAGMB-2015-0060MaRDI QIDQ5962704zbMATH OpenOpenAlexWikidataFDO

Authors Gengxin Li, Yuehua Cui, Hongyu Zhao

Publication date 16 February 2016

Published in Statistical Applications in Genetics and Molecular Biology (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1515/sagmb-2015-0060

zbMATH Keywords

receiver operating characteristic curvecross validationmultiple traitsarea under the ROC curveempirical Bayes estimate

Mathematics Subject Classification ID

Applications of statistics to biology and medical sciences; meta analysis (62P10) Protein sequences, DNA sequences (92D20) Empirical decision procedures; empirical Bayes procedures (62C12)

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Cites work

• scientific article; zbMATH DE number 845714 (Why is no real title available?)
• Admissible Estimators, Recurrent Diffusions, and Insoluble Boundary Value Problems
• Bias-reduced estimators and confidence intervals for odds ratios in genome-wide association studies
• Empirical Bayes estimates for large-scale prediction problems
• Estimation of the mean of a multivariate normal distribution
• Introduction to linear regression analysis.
• On the maximum of bivariate normal random variables
• Random forests
• Ridge Regression: Biased Estimation for Nonorthogonal Problems

Cited in

(8)

• Jackknife model averaging prediction methods for complex phenotypes with gene expression levels by integrating external pathway information
• A weighted empirical Bayes risk prediction model using multiple traits
• On polygenic risk scores for complex traits prediction
• Something Borrowed, Something New: Precise Prediction of Outcomes from Diverse Genomic Profiles
• Integrative genetic risk prediction using non-parametric empirical Bayes classification
• Statistical method for modeling sequencing data from different technologies in longitudinal studies with application to Huntington disease
• Risk classification with an adaptive naive Bayes kernel machine model
• Multi-modal genotype and phenotype mutual learning to enhance single-modal input based longitudinal outcome prediction

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