Nodal distances for rooted phylogenetic trees

DOI10.1007/s00285-009-0295-2zbMath1202.92060arXiv0806.2035OpenAlexW2058366551WikidataQ43972140 ScholiaQ43972140MaRDI QIDQ604511

Gabriel Cardona, Mercè Llabrés, Gabriel Valiente, Francesc Rosselló

Publication date: 11 November 2010

Published in: Journal of Mathematical Biology (Search for Journal in Brave)

Full work available at URL: https://arxiv.org/abs/0806.2035

zbMATH Keywords

Nested taxaNodal metricPath lengthsPhylogenetic treeWeighted tree

Mathematics Subject Classification ID

Trees (05C05) Problems related to evolution (92D15) Applications of graph theory (05C90)

Related Items (3)

The space of ultrametric phylogenetic trees ⋮ On a matching distance between rooted phylogenetic trees ⋮ A partial order and cluster-similarity metric on rooted phylogenetic trees

Uses Software

• OEIS
• TOPD/FMTS
• PhyloNetwork
• clustervalidation

Cites Work

• Unnamed Item
• An algorithm to equiprobably generate all directed trees with k labeled terminal nodes and unlabeled interior nodes
• Encoding phylogenetic trees in terms of weighted quartets
• Comparison of phylogenetic trees
• Geometry of the space of phylogenetic trees
• An algorithm for tree-realizability of distance matrices^∗
• A method for the linear recording of graphs
• A Note on Polar Topologies
• A note on the tree realizability of a distance matrix
• Subtree transfer operations and their induced metrics on evolutionary trees

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