MAGE: strain level profiling of metagenome samples

DOI10.1007/978-3-031-36911-7_14MaRDI QIDQ6086516zbMATH OpenFDO

Authors Vidushi Walia, V. G. Saipradeep, R. Srinivasan, Naveen Sivadasan

Publication date 12 December 2023

Published in Comparative Genomics (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1007/978-3-031-36911-7_14

zbMATH Keywords

abundance estimationmetagenomicsmicrobial strain profiling

Mathematics Subject Classification ID

Computational methods for problems pertaining to biology (92-08) Genetics and epigenetics (92D10)

Recommendations

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Cites work

• Efficient construction of a complete index for pan-genomics read alignment
• scientific article; zbMATH DE number 6850405 (Why is no real title available?)

Cited in

(1)

• VStrains: de novo reconstruction of viral strains via iterative path extraction from assembly graphs

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