scientific article; zbMATH DE number 7716299

DOI10.4230/LIPICS.WABI.2021.13MaRDI QIDQ6133881zbMATH OpenFDO

Authors Travis Gagie, Garance Gourdel, Giovanni Manzini

Publication date 24 July 2023

Full work available at URL https://arxiv.org/abs/1809.07320

zbMATH Keywords

Burrows-Wheeler transformcompact data structuresdata compressionDNA readsEBWTFM-indexXBWT

Mathematics Subject Classification ID

Computational methods for problems pertaining to biology (92-08) Protein sequences, DNA sequences (92D20)

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(6)

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• Comparing DNA sequence collections by direct comparison of compressed text indexes
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• Optimizing Read Reversals for Sequence Compression
• Tailoring r-index for Document Listing Towards Metagenomics Applications

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