Testing for phylogenetic signal in phenotypic traits: new matrices of phylogenetic proximities

DOI10.1016/J.TPB.2007.10.001MaRDI QIDQ615402zbMATH OpenOpenAlexWikidataFDO

Authors Sandrine Pavoine, Sébastien Ollier, Dominique Pontier, Daniel Chessel

Publication date 5 January 2011

Published in Theoretical Population Biology (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/j.tpb.2007.10.001

zbMATH Keywords

autocorrelationpermutation testcomputer simulationcyclic permutationphylogenetic diversitycyclic orderingGeary's \(c\) statisticMoran's \(I\) statisticphenotypic traitphylogenetic signal

Mathematics Subject Classification ID

Applications of statistics to biology and medical sciences; meta analysis (62P10) Problems related to evolution (92D15) Probabilistic models, generic numerical methods in probability and statistics (65C20)

Recommendations

• Statistical approach to tests involving phylogenies
• Putting phylogeny into the analysis of biological traits: a methodological approach
• Invariants of phylogenies in a simple case with discrete states
• Toward extracting all phylogenetic information from matrices of evolutionary distances
• Phylogenetic Inference: Linear Invariants and Maximum Likelihood

Cites work

• scientific article; zbMATH DE number 4054863 (Why is no real title available?)
• scientific article; zbMATH DE number 3550043 (Why is no real title available?)
• scientific article; zbMATH DE number 3053476 (Why is no real title available?)
• Cyclic permutations and evolutionary trees
• Orthonormal Transform to Decompose the Variance of a Life‐History Trait across a Phylogenetic Tree
• The Mean Square Successive Difference
• The evolution of anisogamy: the adaptive significance of damage, repair and mortality

Cited in

(3)

• Orthonormal Transform to Decompose the Variance of a Life‐History Trait across a Phylogenetic Tree
• Analysis of a data matrix and a graph: metagenomic data and the phylogenetic tree
• Putting phylogeny into the analysis of biological traits: a methodological approach

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• ade4

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