Scalable Gromov-Wasserstein based comparison of biological time series

DOI10.1007/S11538-023-01175-YMaRDI QIDQ6168045zbMATH OpenFDO

Authors Natalia Kravtsova, Reginald L. McGee, Adriana T. Dawes

Publication date 8 August 2023

Published in Bulletin of Mathematical Biology (Search for Journal in Brave)

Copyright license Creative Commons Attribution 4.0 International

zbMATH Keywords

optimal transportGromov-Wasserstein distancebiological time seriestime series distance

Mathematics Subject Classification ID

General biostatistics (92B15)

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Cites work

• scientific article; zbMATH DE number 1178976 (Why is no real title available?)
• scientific article; zbMATH DE number 1909499 (Why is no real title available?)
• scientific article; zbMATH DE number 7370595 (Why is no real title available?)
• A review on distance based time series classification
• Gromov-Wasserstein distances and the metric approach to object matching
• Invariant histograms
• Limit cycles for the competitive three dimensional Lotka-Volterra system
• Maximally informative next experiments for nonlinear models
• Optimal transport for applied mathematicians. Calculus of variations, PDEs, and modeling
• The Gromov–Wasserstein distance between networks and stable network invariants
• Time-series data mining
• Unsupervised integration of single-cell multi-omics datasets with disproportionate cell-type representation

Cited in

(1)

• The distance between: an algorithmic approach to comparing stochastic models to time-series data

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