The longest common extension problem revisited and applications to approximate string searching

DOI10.1016/J.JDA.2010.08.004zbMATH Open1213.68719OpenAlexW2002246332MaRDI QIDQ616995FDOQ616995

Gonzalo Navarro, Lucian Ilie, Liviu Tinta

Publication date: 20 January 2011

Published in: Journal of Discrete Algorithms (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.jda.2010.08.004

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zbMATH Keywords

Landau-Vishkin algorithmapproximate string searchlongest common extensionUkkonen's cutoff algorithm

Mathematics Subject Classification ID

Analysis of algorithms (68W40) Algorithms on strings (68W32)

Cites Work

• Algorithms on Strings, Trees and Sequences
• Recursive Star-Tree Parallel Data Structure
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• Suffix Arrays: A New Method for On-Line String Searches
• An \(O(ND)\) difference algorithm and its variations
• Linear time algorithms for finding and representing all the tandem repeats in a string
• Fast Algorithms for Finding Nearest Common Ancestors
• An O(n log n) algorithm for finding all repetitions in a string
• On Finding Lowest Common Ancestors: Simplification and Parallelization
• Fast parallel and serial approximate string matching
• Theoretical and Practical Improvements on the RMQ-Problem, with Applications to LCA and LCE
• Space efficient linear time construction of suffix arrays
• Algorithms for approximate string matching
• Finding approximate patterns in strings
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• Linear Time Suffix Array Construction Using D-Critical Substrings
• Engineering a lightweight suffix array construction algorithm
• Constructing suffix arrays in linear time

Cited In (17)

• Developments in Language Theory
• Computing longest common extensions in partial words
• Practical Performance of Space Efficient Data Structures for Longest Common Extensions.
• Time-Space Trade-Offs for Longest Common Extensions
• Computing the Longest Unbordered Substring
• Longest common extensions in trees
• Searching and Indexing Circular Patterns
• On Maximal Unbordered Factors
• Fast and Simple Computations Using Prefix Tables Under Hamming and Edit Distance
• Longest common substring with approximately \(k\) mismatches
• Range minimum queries in minimal space
• Longest property-preserved common factor: a new string-processing framework
• Fast circular dictionary-matching algorithm
• Longest common extension
• Time-space trade-offs for longest common extensions
• Alignment-free sequence comparison using absent words
• A practical semi-external memory method for approximate pattern matching

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