Phylogenetic network classes through the lens of expanding covers

DOI10.1007/s00285-024-02075-yarXiv2306.06519WikidataQ129176591 ScholiaQ129176591MaRDI QIDQ6204911

Mike A. Steel, Daniele Marchei, Andrew R. Francis

Publication date: 10 April 2024

Published in: Journal of Mathematical Biology (Search for Journal in Brave)

Full work available at URL: https://arxiv.org/abs/2306.06519

zbMATH Keywords

partitionalgorithmsspanning treeencodingphylogenetic networkcharacterising network classesexpanding cover

Mathematics Subject Classification ID

Trees (05C05) Problems related to evolution (92D15)

Cites Work

• Applications of antilexicographic order. I: An enumerative theory of trees
• Identifiability of tree-child phylogenetic networks under a probabilistic recombination-mutation model of evolution
• Tree-based networks: characterisations, metrics, and support trees
• Encoding and ordering \(X\)-cactuses
• Classes of explicit phylogenetic networks and their biological and mathematical significance
• Orchard networks are trees with additional horizontal arcs
• On cherry-picking and network containment
• A class of phylogenetic networks reconstructable from ancestral profiles
• Properties of normal phylogenetic networks
• Matchings and phylogenetic trees
• A Structure Theorem for Rooted Binary Phylogenetic Networks and Its Implications for Tree-Based Networks
• Labellable phylogenetic networks

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