Persistent Homology Transform for Modeling Shapes and Surfaces

DOI10.1093/IMAIAI/IAU011arXiv1310.1030MaRDI QIDQ6245331FDOQ6245331

Sayan Mukherjee, Katharine Turner, Doug M. Boyer

Publication date: 3 October 2013

Abstract: In this paper we introduce a statistic, the persistent homology transform (PHT), to model surfaces in $mathbb{R}^3$ and shapes in $mathbb{R}^2$. This statistic is a collection of persistence diagrams - multiscale topological summaries used extensively in topological data analysis. We use the PHT to represent shapes and execute operations such as computing distances between shapes or classifying shapes. We prove the map from the space of simplicial complexes in $mathbb{R}^3$ into the space spanned by this statistic is injective. This implies that the statistic is a sufficient statistic for probability densities on the space of piecewise linear shapes. We also show that a variant of this statistic, the Euler Characteristic Transform (ECT), admits a simple exponential family formulation which is of use in providing likelihood based inference for shapes and surfaces. We illustrate the utility of this statistic on simulated and real data.

Mathematics Subject Classification ID

Image analysis in multivariate analysis (62H35)

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