Combinatorics on update digraphs in Boolean networks

DOI10.1016/J.DAM.2010.10.010MaRDI QIDQ628333zbMATH OpenOpenAlexFDO

Authors E. Fanchon, Julio Aracena, Marco Montalva, Mathilde Noual

Publication date 10 March 2011

Published in Discrete Applied Mathematics (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/j.dam.2010.10.010

zbMATH Keywords

Boolean networkfeedback arc setupdate scheduleupdate digraph

Mathematics Subject Classification ID

Applications of graph theory (05C90) Directed graphs (digraphs), tournaments (05C20) Enumeration in graph theory (05C30) Connectivity (05C40)

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Cites work

• scientific article; zbMATH DE number 47903 (Why is no real title available?)
• scientific article; zbMATH DE number 3639144 (Why is no real title available?)
• scientific article; zbMATH DE number 854567 (Why is no real title available?)
• Discrete, sequential dynamical systems
• ON ASYNCHRONOUS CELLULAR AUTOMATA
• Robustness and fragility of Boolean models for genetic regulatory networks

Cited in

(21)

• Attractor landscapes in Boolean networks with firing memory: a theoretical study applied to genetic networks
• Characterisation of the elementary cellular automata in terms of their maximum sensitivity to all possible asynchronous updates
• Disjunctive networks and update schedules
• Maximum sensitivity to update schedules of elementary cellular automata over periodic configurations
• Sequentialization and procedural complexity in automata networks
• A spectral outlook on the elementary cellular automata with cyclic configurations and block-sequential asynchronous updates
• From multiple to single updates per cell in elementary cellular automata with neighbourhood based priority
• About non-monotony in Boolean automata networks
• Asymptotic (a)synchronism sensitivity and complexity of elementary cellular automata
• Limit cycles and update digraphs in Boolean networks
• Non-maximal sensitivity to synchronism in elementary cellular automata: exact asymptotic measures
• Asynchronous, finite dynamical systems
• Complexity of limit cycles with block-sequential update schedules in conjunctive networks
• On the number of update digraphs and its relation with the feedback arc sets and tournaments
• Characterisation of the elementary cellular automata with neighbourhood priority based deterministic updates
• \#P-completeness of counting update digraphs, cacti, and series-parallel decomposition method
• Block-sequential update schedules and Boolean automata circuits
• About block-parallel Boolean networks: a position paper
• Maximum sensitivity to update schedules of elementary cellular automata over infinite configurations
• Computational complexity of minimal trap spaces in Boolean networks
• On the number of different dynamics in Boolean networks with deterministic update schedules

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