On computational properties of gene assembly in ciliates

MaRDI QIDQ652891zbMATH OpenFDO

Authors Vladimir Rogojin

Publication date 5 January 2012

Published in Computer Science Journal of Moldova (Search for Journal in Brave)

zbMATH Keywords

sortinggene assemblystring rewriting

Mathematics Subject Classification ID

Protein sequences, DNA sequences (92D20) Modes of computation (nondeterministic, parallel, interactive, probabilistic, etc.) (68Q10) Theory of computing (68Q99)

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(10)

• On combinatorial properties of elementary intramolecular operations
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• Theoretical and computational properties of transpositions
• Descrambling order analysis in ciliates
• Computation in living cells. Gene assembly in ciliates
• On combinatorial properties of elementary intramolecular operations
• Gene assembly in ciliates: Computing by folding and recombination
• Extending the Overlap Graph for Gene Assembly in Ciliates
• How ciliates manipulate their own DNA -- A splendid example of natural computing
• Graph Polynomials Motivated by Gene Rearrangements in Ciliates

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