Entropy and information approaches to genetic diversity and its expression: genomic geography

DOI10.3390/E12071765MaRDI QIDQ657482zbMATH OpenOpenAlexWikidataFDO

Authors William B. Sherwin

Publication date 9 January 2012

Published in Entropy (Search for Journal in Brave)

Full work available at URL https://doi.org/10.3390/e12071765

zbMATH Keywords

entropyinformationgene expressiongenome-wide association studiesdispersalDNA sequencenatural selectionmigrationsubdivisionlinkage disequilibriumgene regulationgenesdisease phenotypes

Mathematics Subject Classification ID

Biochemistry, molecular biology (92C40) Genetics and epigenetics (92D10) Measures of information, entropy (94A17)

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Cites work

• scientific article; zbMATH DE number 458748 (Why is no real title available?)
• scientific article; zbMATH DE number 3064561 (Why is no real title available?)
• A Mathematical Theory of Communication
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• Information theory in living systems, methods, applications, and challenges
• Linkage disequilibrium due to random genetic drift in finite subdivided populations
• On the application of statistical physics to evolutionary biology
• Ordering genetic algorithm genomes with reconstructability analysis
• Possible generalization of Boltzmann-Gibbs statistics.
• Statistical mechanics unifies different ecological patterns
• The sampling theory of selectively neutral alleles
• The statistics of gene mapping
• Towards a unifying approach to diversity measures: bridging the gap between the Shannon entropy and Rao's quadratic index
• Weighted entropy

Cited in

(10)

• Mutual entropy in quantum information and information genetics
• Information, evolution and ``error-friendliness
• scientific article; zbMATH DE number 1282446 (Why is no real title available?)
• Statistical measures as measures of diversity
• Dynamics of entropy in evolution models
• Minimum mutual information and non-Gaussianity through the maximum entropy method: estimation from finite samples
• scientific article; zbMATH DE number 2134549 (Why is no real title available?)
• Profiling cytogenetic diversity with entropy-based karyotypic analysis
• Defining diversity, specialization, and gene specificity in transcriptomes through information theory
• Bounding measures of genetic similarity and diversity using majorization

Describes a project that uses

Uses Software

• TETRASAT
• GenAlEx
• SPSS

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