Variational supertrees for Bayesian phylogenetics

DOI10.1007/S11538-024-01338-5MaRDI QIDQ6597995zbMATHFDO

Authors Michael D. Karcher, Cheng Zhang, Frederic A. IV Matsen

Publication date 4 September 2024

Published in Bulletin of Mathematical Biology (Search for Journal in Brave)

zbMATH Keywords

phylogeneticsvariational methodsdivide-and-conquergradient descentsupertrees

Mathematics Subject Classification ID

Bayesian inference (62F15) Problems related to evolution (92D15)

Recommendations

• Bayesian Phylogenetic Inference via Markov Chain Monte Carlo Methods
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Cites work

• scientific article; zbMATH DE number 1746436 (Why is no real title available?)
• scientific article; zbMATH DE number 1865935 (Why is no real title available?)
• Bayesian phylogenetic inference using a combinatorial sequential Monte Carlo method
• Monte Carlo sampling methods using Markov chains and their applications
• Phylogenetic supertrees. Combining information to reveal the tree of life
• The complexity of reconstructing trees from qualitative characters and subtrees

Cited in

(2)

• Prior density learning in variational Bayesian phylogenetic parameters inference
• Improving tree probability estimation with stochastic optimization and variance reduction

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