Sequencing by hybridization with isothermic oligonucleotide libraries

DOI10.1016/J.DAM.2003.09.006zbMATH Open1056.92019OpenAlexW1993429924WikidataQ57387802 ScholiaQ57387802MaRDI QIDQ705498FDOQ705498

Marta Kasprzak, Jacek Blazewicz, Piotr Formanowicz, Wojciech T. Markiewicz

Publication date: 31 January 2005

Published in: Discrete Applied Mathematics (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.dam.2003.09.006

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zbMATH Keywords

DNA sequencingIsothermic oligonucleotide libraries

Mathematics Subject Classification ID

Complexity and performance of numerical algorithms (65Y20) Biochemistry, molecular biology (92C40) Protein sequences, DNA sequences (92D20) Combinatorics on words (68R15)

Cites Work

• Title not available (Why is that?)
• On some properties of DNA graphs
• Complexity of DNA sequencing by hybridization.
• On finding minimal length superstrings
• Tabu search for DNA sequencing with false negatives and false positives

Cited In (11)

• Title not available (Why is that?)
• Title not available (Why is that?)
• Computational complexity of isothermic DNA sequencing by hybridization
• About the design of oligo-chips
• Graph algorithms for DNA sequencing -- origins, current models and the future
• Dealing with repetitions in sequencing by hybridization
• An algorithm for isothermic DNA sequencing
• Multistage isothermic sequencing by hybridization
• Evolutionary approaches to DNA sequencing with errors
• Classification of de Bruijn-based labeled digraphs
• Tabu search algorithm for DNA sequencing by hybridization with isothermic libraries

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