Trajectories of DNA bubbles

DOI10.1016/J.CHAOS.2015.02.009zbMATH Open1352.92051OpenAlexW2081885582MaRDI QIDQ727773FDOQ727773

Authors: Andrey A. Grinevich, Artem A. Ryasik, L. V. Yakushevich 

Publication date: 21 December 2016

Published in: Chaos, Solitons and Fractals (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.chaos.2015.02.009

Recommendations

• Nonlinear waves in double-stranded DNA
• Does the dynamics of sine\,-\,Gordon solitons predict active regions of DNA?
• The influence of the DNA torque on the dynamics of transcription bubbles in plasmid PTTQ18
• Bubble dynamics in DNA
• Coupled sine-Gordon systems in DNA dynamics

zbMATH Keywords

kinkDNA dynamicsmodified sine-Gordon equationDNA bubble

Mathematics Subject Classification ID

Biochemistry, molecular biology (92C40) Protein sequences, DNA sequences (92D20) Soliton solutions (35C08) PDEs in connection with biology, chemistry and other natural sciences (35Q92)

Cites Work

• Revisiting Salerno's sine-Gordon model of DNA: active regions and robustness
• Nonlinear DNA dynamics: Hierarchy of the models
• Propagation of twist solitons in fully inhomogeneous DNA chains
• Theoretical physics of DNA: new ideas and tendencies in the modeling of the DNA nonlinear dynamics

Cited In (9)

• Nonlinear waves in double-stranded DNA
• Bubble dynamics in DNA
• Does the dynamics of sine\,-\,Gordon solitons predict active regions of DNA?
• Base pairs opening and bubble transport in damped DNA dynamics with transport memory effects
• Trajectories of DNA kinks
• The influence of the DNA torque on the dynamics of transcription bubbles in plasmid PTTQ18
• Revisiting Salerno's sine-Gordon model of DNA: active regions and robustness
• Scattering of kinks in the \(B\varphi^4\) model
• Loop exponent in DNA bubble dynamics

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