Convergence of methods for coupling of microscopic and mesoscopic reaction-diffusion simulations
From MaRDI portal
Publication:729183
DOI10.1016/J.JCP.2015.01.030zbMath1352.65023arXiv1304.7393OpenAlexW2146689624WikidataQ27309988 ScholiaQ27309988MaRDI QIDQ729183
Stefan Hellander, Mark B. Flegg, Radek Erban
Publication date: 20 December 2016
Published in: Journal of Computational Physics (Search for Journal in Brave)
Full work available at URL: https://arxiv.org/abs/1304.7393
Particle methods and lattice-gas methods (76M28) Stochastic particle methods (65C35) Probabilistic methods, particle methods, etc. for initial value and initial-boundary value problems involving PDEs (65M75)
Related Items (8)
Stochastic simulations of the Schnakenberg model with spatial inhomogeneities using reactive multiparticle collision dynamics ⋮ Particle-Based Multiscale Modeling of Calcium Puff Dynamics ⋮ Multiscale Simulation of Stochastic Reaction-Diffusion Networks ⋮ Efficient ensemble stochastic algorithms for agent-based models with spatial predator-prey dynamics ⋮ Unnamed Item ⋮ Coarse-graining molecular dynamics: stochastic models with non-Gaussian force distributions ⋮ Multiscale stochastic reaction-diffusion algorithms combining Markov chain models with stochastic partial differential equations ⋮ A hybrid method for micro-mesoscopic stochastic simulation of reaction-diffusion systems
Uses Software
Cites Work
- Multiscale simulation of water flow past a \(C_{540}\) fullerene
- Multiscale stochastic reaction-diffusion modeling: application to actin dynamics in filopodia
- Algorithm refinement for stochastic partial differential equations. I: Linear diffusion.
- Multiscale Reaction-Diffusion Algorithms: PDE-Assisted Brownian Dynamics
- Analysis of the Two-Regime Method on Square Meshes
- Coupled Mesoscopic and Microscopic Simulation of Stochastic Reaction-Diffusion Processes in Mixed Dimensions
- Hybrid computations with flux exchange
- Analysis of Brownian Dynamics Simulations of Reversible Bimolecular Reactions
- Simulation of Stochastic Reaction-Diffusion Processes on Unstructured Meshes
- From molecular dynamics to Brownian dynamics
This page was built for publication: Convergence of methods for coupling of microscopic and mesoscopic reaction-diffusion simulations