PENDISC: a simple method for constructing a mathematical model from time-series data of metabolite concentrations

DOI10.1007/S11538-014-9960-8MaRDI QIDQ742382zbMATH OpenOpenAlexWikidataFDO

Authors Kansuporn Sriyudthsak, Michio Iwata, Masami Yokota Hirai, Fumihide Shiraishi

Publication date 18 September 2014

Published in Bulletin of Mathematical Biology (Search for Journal in Brave)

Copyright license Creative Commons Attribution 4.0 International

Full work available at URL https://doi.org/10.1007/s11538-014-9960-8

zbMATH Keywords

biochemical systems theorymathematical modelingmetabolomicsnonlinear least squared regressionparameter estimation

Mathematics Subject Classification ID

Systems biology, networks (92C42) Kinetics in biochemical problems (pharmacokinetics, enzyme kinetics, etc.) (92C45)

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Cites work

• A simple and highly accurate numerical differentiation method for sensitivity analysis of large-scale metabolic reaction systems
• Biochemical systems theory: a review
• Joint maximum-likelihood estimation of frequency offset and channel coefficients in multiple-input multiple-output orthogonal frequency-division multiplexing systems with timing ambiguity
• Numerical recipes in C++. The art of scientific computing

Cited in

(2)

• Investigation of kinetic-order sensitivities in metabolic reaction networks
• A new parametric method to smooth time-series data of metabolites in metabolic networks

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