The exact joint distribution of the sum of heads and apparent size statistics of a ``tandem repeats finder algorithm

DOI10.1007/S11538-006-9146-0MaRDI QIDQ743826zbMATH OpenOpenAlexWikidataFDO

Authors Donald E. K. Martin

Publication date 30 September 2014

Published in Bulletin of Mathematical Biology (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1007/s11538-006-9146-0

zbMATH Keywords

finite Markov chain imbeddingtandem repeats

Mathematics Subject Classification ID

Genetics and epigenetics (92D10)

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Cites work

• Distribution of the number of successes in success runs of length at least \(k\) in higher-order Markovian sequences
• Distribution theory of runs and patterns and its applications. A finite Markov chain imbedding approach
• On the distribution of the number of successes in fourth- or lower-order Markovian trials
• The exact and limiting distributions for the number of successes in success runs within a sequence of Markov-dependent two-state trials
• The exact distribution of the \(k\)-tuple statistic for sequence homology

Cited in

(6)

• The exact distribution of the \(k\)-tuple statistic for sequence homology
• Faster exact distributions of pattern statistics through sequential elimination of states
• Accurate genome-scale percentage DNA methylation estimates from microarray data
• Fine-tuning the search for microsatellites
• Minimal auxiliary Markov chains through sequential elimination of states
• PRINCE: accurate approximation of the copy number of tandem repeats

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