Torsion of DNA modeled as a heterogeneous fluctuating rod

DOI10.1016/J.JMPS.2013.09.020zbMATH Open1323.92147OpenAlexW2036808880MaRDI QIDQ748727FDOQ748727

Authors: David Argudo, Prashant K. Purohit 

Publication date: 30 October 2015

Published in: Journal of the Mechanics and Physics of Solids (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.jmps.2013.09.020

Recommendations

• A NOTE ON THE ANALYSIS OF A HETEROGENEOUS ROD-LIKE CHAIN IN DNA MODELING
• Plectoneme formation in twisted fluctuating rods
• Thermomechanics of a heterogeneous fluctuating chain
• A double-strand elastic rod theory
• Thermal fluctuations of small rings of intrinsically helical DNA treated like an elastic rod

zbMATH Keywords

DNAphase transitionsstatistical mechanicsheterogeneous elastic materialsingle-molecule experiments

Mathematics Subject Classification ID

Protein sequences, DNA sequences (92D20) Structured surfaces and interfaces, coexistent phases (74A50) Rods (beams, columns, shafts, arches, rings, etc.) (74K10) Phase transitions (general) in equilibrium statistical mechanics (82B26)

Cites Work

• Helical and localised buckling in twisted rods: A unified analysis of the symmetric case
• Helices
• Nonlinear dynamics and loop formation in Kirchhoff rods with implications to the mechanics of DNA and cables
• The Writhing Number of a Space Curve
• A double-strand elastic rod theory
• The structural basis of DNA flexibility
• Conformational analysis of stiff chiral polymers with end-constraints
• Thermomechanics of a heterogeneous fluctuating chain

Cited In (10)

• Writhe of DNA induced by a terminal twist
• Theory of self–contact in Kirchhoff rods with applications to supercoiling of knotted and unknotted DNA plasmids
• A NOTE ON THE ANALYSIS OF A HETEROGENEOUS ROD-LIKE CHAIN IN DNA MODELING
• Robust estimation of nonlinear constitutive law from static equilibrium data for modeling the mechanics of DNA
• Twisting short dsDNA with applied tension
• Thermomechanics of a heterogeneous fluctuating chain
• Looping mechanics of rods and DNA with non-homogeneous and discontinuous stiffness
• Plectoneme formation in twisted fluctuating rods
• Application of perturbation theory to elastic models of DNA
• Title not available (Why is that?)

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