On realizing shapes in the theory of RNA neutral networks

DOI10.1016/J.JTBI.2005.03.006zbMATH Open1442.92115OpenAlexW2122548297WikidataQ51974552 ScholiaQ51974552MaRDI QIDQ776594FDOQ776594

Authors: Peter Clote, Leszek Gąsieniec, Evangelos Kranakis, D. Krizanc, Roman Kolpakov 

Publication date: 9 July 2020

Published in: Journal of Theoretical Biology (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.jtbi.2005.03.006

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zbMATH Keywords

NP-completenessneutral networkNussinov-Jacobson energy modelRNA conformational switch

Mathematics Subject Classification ID

Protein sequences, DNA sequences (92D20) Analysis of algorithms and problem complexity (68Q25)

Cites Work

• Introduction to algorithms
• Title not available (Why is that?)
• Generic properties of combinatory maps: Neutral networks of RNA secondary structures

Cited In (5)

• Combinatorial RNA design: designability and structure-approximating algorithm
• Neutral networks of sequence to shape maps
• Efficient design of compact unstructured RNA libraries covering all \(k\)-mers
• Title not available (Why is that?)
• Combinatorial RNA design: designability and structure-approximating algorithm in Watson-Crick and Nussinov-Jacobson energy models

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