Convex hulls of orbits and orientations of a moving protein domain

DOI10.1007/S00454-008-9076-8MaRDI QIDQ848852zbMATHOpenAlexFDO

Authors Marco Longinetti, Luca Sgheri, Frank Sottile

Publication date 23 February 2010

Published in Discrete \& Computational Geometry (Search for Journal in Brave)

Full work available at URL https://arxiv.org/abs/0712.3777

zbMATH Keywords

representationscompact groupmagnetic susceptibility tensorCarathéodory number

Mathematics Subject Classification ID

Biochemistry, molecular biology (92C40) Compact groups (22C05) Biophysics (92C05) General convexity (52A99)

Abstract: We study the facial structure and Carath'eodory number of the convex hull of an orbit of the group of rotations in R^3 acting on the space of pairs of anisotropic symmetric 3 imes 3 tensors. This is motivated by the problem of determining the structure of some proteins in aqueous solution.

Recommendations

• Convex geometry of orbits
• ORBITOPES
• Conformational freedom of proteins and the maximal probability of sets of orientations
• Reconstruction of orientations of a moving protein domain from paramagnetic data
• Semidefinite Descriptions of the Convex Hull of Rotation Matrices

Cites work

• scientific article; zbMATH DE number 3929321 (Why is no real title available?)
• scientific article; zbMATH DE number 236540 (Why is no real title available?)
• scientific article; zbMATH DE number 3048077 (Why is no real title available?)
• Efficient determination of the most favoured orientations of protein domains from paramagnetic NMR data
• Generalizations of a theorem of Carathéodory
• Reconstruction of orientations of a moving protein domain from paramagnetic data
• The quadratic moment problem for the unit circle and unit disk
• Uniqueness and degeneracy in the localization of rigid structural elements in paramagnetic proteins

Cited in

(5)

• Looking for central tendencies in the conformational freedom of proteins using NMR measurements
• Conformational freedom of proteins and the maximal probability of sets of orientations
• Semidefinite Descriptions of the Convex Hull of Rotation Matrices
• Barycenters of points in polytope skeleta
• ORBITOPES

This page was built for publication: Convex hulls of orbits and orientations of a moving protein domain

Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q848852)