Hydrophobic collapse in (in silico) protein folding

DOI10.1016/J.COMPBIOLCHEM.2006.04.007zbMATH Open1098.92024OpenAlexW2055140399WikidataQ28248302 ScholiaQ28248302MaRDI QIDQ849523FDOQ849523

Authors: Michal Brylinski, Leszek Konieczny, Irena Roterman 

Publication date: 31 October 2006

Published in: Computational Biology and Chemistry (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.compbiolchem.2006.04.007

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zbMATH Keywords

protein structure predictionhydrophobic collapselate-stage folding

Mathematics Subject Classification ID

Biochemistry, molecular biology (92C40) Biophysics (92C05)

Cites Work

• AMBER, a package of computer programs for applying molecular mechanics, normal mode analysis, molecular dynamics and free energy calculations to simulate the structural and energetic properties of molecules
• Hydrophobic collapse in (in silico) protein folding

Cited In (4)

• Hydrophobic collapse in (in silico) protein folding
• Two-intermediate model to characterize the structure of fast-folding proteins
• Stochastic protein folding simulation in the three-dimensional HP-model
• Hydrophobic and ionic-interactions in bulk and confined water with implications for collapse and folding of proteins

Uses Software

• VMD

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