Efficient bottom-up hybrid hierarchical clustering techniques for protein sequence classification

DOI10.1016/J.PATCOG.2005.12.001MaRDI QIDQ850138zbMATH OpenOpenAlexFDO

Authors P. A. Vijaya, M. Narasimha Murty, D. K. Subramanian

Publication date 15 November 2006

Published in Pattern Recognition (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/j.patcog.2005.12.001

zbMATH Keywords

feature selectionclassification accuracyhierarchical structureprototypesprotein sequenceshybrid clusteringmedian strings/sequences

Mathematics Subject Classification ID

Pattern recognition, speech recognition (68T10)

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Cites work

• scientific article; zbMATH DE number 3678973 (Why is no real title available?)
• scientific article; zbMATH DE number 41467 (Why is no real title available?)
• scientific article; zbMATH DE number 3579840 (Why is no real title available?)
• scientific article; zbMATH DE number 1196648 (Why is no real title available?)
• scientific article; zbMATH DE number 1455130 (Why is no real title available?)
• A fuzzy hybrid hierarchical clustering method with a new criterion able to find the optimal partition
• A new algorithm for hybrid hierarchical clustering with visualization and the bootstrap
• A time-efficient, linar-space local similarity algorithm
• Finding Groups in Data
• Median strings for k-nearest neighbour classification
• Pattern Recognition Algorithms for Data Mining

Cited in

(8)

• The method for identification of hierarchical organization of protein sequences
• An efficient cluster analysis method for protein sequences
• Hierarchical clustering of large databases and classification of antibiotics at high noise levels
• SEP/COP: an efficient method to find the best partition in hierarchical clustering based on a new cluster validity index
• A Comparative Study of Protein Sequence Clustering Algorithms
• Hybrid hierarchical clustering with applications to microarray data
• A distance based clustering method for arbitrary shaped clusters in large datasets
• Hierarchically clustered HMM for protein sequence motif extraction with variable length

Describes a project that uses

Uses Software

• clusfind
• ROCK

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