Non-equilibrium theory of the allele frequency spectrum

DOI10.1016/j.tpb.2006.06.005zbMath1118.92041arXivq-bio/0604010WikidataQ46543740 ScholiaQ46543740MaRDI QIDQ885377

Yelena Shvets, Steven N. Evans, Montgomery Slatkin

Publication date: 13 June 2007

Published in: Theoretical Population Biology (Search for Journal in Brave)

Full work available at URL: https://arxiv.org/abs/q-bio/0604010

zbMATH Keywords

Kolmogorov forward equation; Population genetics; Diffusion theory; Entrance law; recent human population growth

Mathematics Subject Classification ID

92D15: Problems related to evolution

60H30: Applications of stochastic analysis (to PDEs, etc.)

92D10: Genetics and epigenetics

60J70: Applications of Brownian motions and diffusion theory (population genetics, absorption problems, etc.)

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Analytical results on the neutral non-equilibrium allele frequency spectrum based on diffusion theory, Non-equilibrium allele frequency spectra via spectral methods, Analytical results on the neutral non-equilibrium allele frequency spectrum based on diffusion theory, Non-equilibrium allele frequency spectra via spectral methods, A modified wright-Fisher model that incorporates \(N_e\): a variant of the standard model with increased biological realism and reduced computational complexity, The effect of recurrent mutation on the frequency spectrum of a segregating site and the age of an allele, The site-frequency spectrum of linked sites, Inference in population genetics using forward and backward, discrete and continuous time processes, The diversity of a distributed genome in bacterial populations, Joint effect of changing selection and demography on the site frequency spectrum, Developments in coalescent theory from single loci to chromosomes, An analytical framework in the general coalescent tree setting for analyzing polymorphisms created by two mutations, The joint allele frequency spectrum of multiple populations: a coalescent theory approach, The allele-frequency spectrum in a decoupled Moran model with mutation, drift, and directional selection, assuming small mutation rates, The non-equilibrium allele frequency spectrum in a Poisson random field framework, Eigenfunctions and the Dirichlet Problem for the Classical Kimura Diffusion Operator

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