A mixing tree-valued process arising under neutral evolution with recombination

DOI10.1214/EJP.V20-4286zbMATH Open1371.92096arXiv1505.01165MaRDI QIDQ894152FDOQ894152

Andrej Depperschmidt, Peter Pfaffelhuber, Etienne Pardoux

Publication date: 27 November 2015

Published in: Electronic Journal of Probability (Search for Journal in Brave)

Abstract: The genealogy at a single locus of a constant size $N$ population in equilibrium is given by the well-known Kingman's coalescent. When considering multiple loci under recombination, the ancestral recombination graph encodes the genealogies at all loci in one graph. For a continuous genome $G$, we study the tree-valued process $(T_u^N{)}_{uinG}$ of genealogies along the genome in the limit $Noinfty$. Encoding trees as metric measure spaces, we show convergence to a tree-valued process with cadlag paths. In addition, we study mixing properties of the resulting process for loci which are far apart.

Full work available at URL: https://arxiv.org/abs/1505.01165

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zbMATH Keywords

ancestral recombination graphKingman coalescentGromov-Hausdorff metrictree-valued process

Mathematics Subject Classification ID

Genetics and epigenetics (92D10) Problems related to evolution (92D15) Interacting random processes; statistical mechanics type models; percolation theory (60K35) Stationary stochastic processes (60G10)

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