Simultaneous cancer classification and gene selection with Bayesian nearest neighbor method: an integrated approach

DOI10.1016/J.CSDA.2008.10.012MaRDI QIDQ961289zbMATH OpenOpenAlexFDO

Authors Sounak Chakraborty

Publication date 30 March 2010

Published in Computational Statistics and Data Analysis (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/j.csda.2008.10.012

Mathematics Subject Classification ID

Computational methods for problems pertaining to statistics (62-08) Bayesian inference (62F15) Classification and discrimination; cluster analysis (statistical aspects) (62H30) Applications of statistics to biology and medical sciences; meta analysis (62P10)

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Cites work

• A Probabilistic Nearest Neighbour Method for Statistical Pattern Recognition
• Adaptive Rejection Sampling for Gibbs Sampling
• Bayesian Classification of Tumours by Using Gene Expression Data
• Bayesian image restoration, with two applications in spatial statistics (with discussion)
• Bayesian Variable Selection in Multinomial Probit Models to Identify Molecular Signatures of Disease Stage
• Comparison of Discrimination Methods for the Classification of Tumors Using Gene Expression Data
• Equation of state calculations by fast computing machines
• Gene selection for cancer classification using support vector machines
• Hierarchical Bayesian Neural Networks
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• Inference from iterative simulation using multiple sequences
• OnL₁-Norm Multiclass Support Vector Machines
• Random forests
• Regularized simultaneous model selection in multiple quantiles regression
• Sampling-Based Approaches to Calculating Marginal Densities
• Simultaneous selection of variables and smoothing parameters in structured additive regression models
• Stochastic Relaxation, Gibbs Distributions, and the Bayesian Restoration of Images
• The elements of statistical learning. Data mining, inference, and prediction

Cited in

(7)

• NIM: a node influence based method for cancer classification
• Bayesian adaptive nearest neighbor
• Combining Nearest Neighbor Classifiers Versus Cross-Validation Selection
• Simple Bayesian binary framework for discovering significant genes and classifying cancer diagnosis
• Multiclass classification and gene selection with a stochastic algorithm
• Bayesian binary kernel probit model for microarray based cancer classification and gene selection
• Pattern recognition via projection-based \(k\)NN rules

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Uses Software

• spBayes

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