A p-adic model of DNA sequence and genetic code
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Publication:974436
DOI10.1134/S2070046609010038zbMATH Open1187.92039arXivq-bio/0607018OpenAlexW2037719166MaRDI QIDQ974436FDOQ974436
Branko Dragovich, A. Yu. Dragovich
Publication date: 3 June 2010
Published in: \(p\)-Adic Numbers, Ultrametric Analysis, and Applications (Search for Journal in Brave)
Abstract: Using basic properties of p-adic numbers, we consider a simple new approach to describe main aspects of DNA sequence and genetic code. Central role in our investigation plays an ultrametric p-adic information space which basic elements are nucleotides, codons and genes. We show that a 5-adic model is appropriate for DNA sequence. This 5-adic model, combined with 2-adic distance, is also suitable for genetic code and for a more advanced employment in genomics. We find that genetic code degeneracy is related to the p-adic distance between codons.
Full work available at URL: https://arxiv.org/abs/q-bio/0607018
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Biochemistry, molecular biology (92C40) Genetics and epigenetics (92D10) Computational methods for problems pertaining to biology (92-08)
Cites Work
- Title not available (Why is that?)
- p-adic models of ultrametric diffusion constrained by hierarchical energy landscapes
- p-adic description of characteristic relaxation in complex systems
- Application ofp-adic analysis to models of breaking of replica symmetry
- A \(p\)-adic model of DNA sequence and genetic code
- Quantum groups and the genetic code
- Ultrametric Analysis and Interbasin Kinetics
Cited In (43)
- DNA coding and Gödel numbering
- Ultrametricity in the theory of complex systems
- 2-adic numbers in genetics and Rumer's symmetry
- Ultrametrics in the genetic code and the genome
- On measurements, numbers and \(p\)-adic mathematical physics
- Degenerating families of dendrograms
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- A \(p\)-adic model of DNA sequence and genetic code
- On \(p\)-adic mathematical physics
- Giorgio Parisi: the Nobel Prize in Physics 2021
- Symmetry in data mining and analysis: a unifying view based on hierarchy
- A recurrent random walk on the \(p\)-adic integers
- Non-Archimedean replicator dynamics and Eigen’s paradox
- \(p\)-adic dynamical representation of gene expression
- 2-adic clustering of the PAM matrix
- \(p\)-adic mathematical physics: the first 30 years
- \(p\)-adic invariant summation of some \(p\)-adic functional series
- Crystal basis model: codon-anticodon interaction and genetic code evolution
- Title not available (Why is that?)
- Genetic code and deformation of the 2-dimensional 2-adic metric
- Linear fractional \(p\)-adic and adelic dynamical systems
- Counting with Probabilistic and Ultrametric Finite Automata
- Wavelet analysis on symbolic sequences and two-fold de Bruijn sequences
- \(p\)-adic integral operators in wavelet bases
- Modeling the Genetic Code: p-Adic Approach
- Mumford dendrograms and discrete \(p\)-adic symmetries
- Modelling of psychological behavior on the basis of ultrametric mental space: encoding of categories by balls
- Methods and applications of ultrametric and \(p\)-adic analysis: from wavelet theory to biophysics
- On summation of 𝑝-adic series
- Ultrametric diffusion equation on energy landscape to model disease spread in hierarchic socially clustered population
- Gene expression from polynomial dynamics in the 2-adic information space
- Noncommutative algebraic dynamics: ergodic theory for profinite groups
- On \(p\)-adic description of glutathione synthesis
- Spectral density estimation for symmetric stable p-adic processes
- Eigen's paradox and the quasispecies model in a non-Archimedean framework
- A number theoretical observation about the degeneracy of the genetic code
- p-Adic Side of the Genetic Code and the Genome
- Summation of p-adic functional series in integer points
- Replica procedure for probabilistic algorithms as a model of gene duplication
- Gene expression from 2-adic dynamical systems
- Quincunx multiresolution analysis for \(L^2(\mathbb Q^2_2)\)
- Towards p-adic artificial language
- Многомерная $p$-адическая метрика и генетический код
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