Presentations of semigroup algebras of weighted trees

DOI10.1007/S10801-009-0195-YzbMATH Open1230.05159arXiv0808.1320OpenAlexW2087290769MaRDI QIDQ976840FDOQ976840

Christopher Manon

Publication date: 16 June 2010

Published in: Journal of Algebraic Combinatorics (Search for Journal in Brave)

Abstract: We find presentations for subalgebras of invariants of the coordinate algebras of binary symmetric models of phylogenetic trees studied by Buczynska and Wisniewski in cite{BW}. These algebras arise as toric degenerations of rings of global sections of weight varieties of the Grassmanian of two planes associated to the Pl"ucker embedding, and as toric degenerations of rings of invariants of Cox-Nagata rings.

Full work available at URL: https://arxiv.org/abs/0808.1320

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zbMATH Keywords

phylogeneticspolytopetoric ideal

Mathematics Subject Classification ID

Trees (05C05) Graphs and abstract algebra (groups, rings, fields, etc.) (05C25)

Cites Work

• Title not available (Why is that?)
• The Toric Geometry of Triangulated Polygons in Euclidean Space
• Sagbi bases of Cox-Nagata rings
• The tropical Grassmannian
• Title not available (Why is that?)
• On geometry of binary symmetric models of phylogenetic trees
• Hilbert's 14th problem and Cox rings
• The relations among invariants of points on the projective line
• Parabolic bundles, elliptic surfaces and \(SU(2)\)-representation spaces of genus zero Fuchsian groups

Cited In (11)

• The ring of evenly weighted points on the line
• Trees, congruences and varieties of finite semigroups
• Gorenstein semigroup algebras of weighted trees and ordered points on the projective line
• A Fano compactification of the \(\mathrm{SL}_2(\mathbb{C})\) free group character variety
• Conformal blocks, Berenstein-Zelevinsky triangles, and group-based models
• Semigroup theory of symmetry
• Classification of Rota-Baxter operators on semigroup algebras of order two and three
• Tree Algebras, Semidiscreteness, and Dilation Theory
• The algebra of \(\mathrm{SL}_3(\mathbb{C})\) conformal blocks
• Coordinate rings for the moduli stack of \(\mathrm{SL}(\mathbb C)\) quasi-parabolic principal bundles on a curve and toric fiber products
• Blow-ups of \(\mathbb{P}^{n-3}\) at \(n\) points and spinor varieties

Uses Software

• 4ti2

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