A network flow model for biclustering via optimal re-ordering of data matrices

DOI10.1007/s10898-008-9349-zzbMath1200.90030MaRDI QIDQ989888

Joshua D. Rabinowitz, Xiao-Jiang Feng, Scott R. McAllister, Christodoulos A. Floudas, Peter A. jun. DiMaggio, Herschel Rabitz

Publication date: 23 August 2010

Published in: Journal of Global Optimization (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1007/s10898-008-9349-z

zbMATH Keywords

biclustering; mixed-integer linear optimization (MILP)

Mathematics Subject Classification ID

90C11: Mixed integer programming

90B10: Deterministic network models in operations research

Related Items

Mathematical modeling and efficient optimization methods for the distance-dependent rearrangement clustering problem, Comments on: Optimization and data mining in biomedicine

Uses Software

• CPLEX
• Concorde

Cites Work

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• Experiments in projection and clustering by simulated annealing
• Splitting an ordering into a partition to minimize diameter
• Prediction of oligopeptide conformations via deterministic global optimization
• Ab initio tertiary structure prediction of proteins
• A novel clustering approach and prediction of optimal number of clusters: global optimum search with enhanced positioning
• Feature selection for consistent biclustering via fractional 0-1 programming
• Some Simple Applications of the Travelling Salesman Problem
• Technical Note—Clustering a Data Array and the Traveling-Salesman Problem
• Information-based clustering
• An optimization-based approach for data classification