Measures for the exceptionality of gene order in conserved genomic regions

DOI10.1016/J.AAM.2010.02.002zbMATH Open1194.62115OpenAlexW2080114055WikidataQ56608995 ScholiaQ56608995MaRDI QIDQ990766FDOQ990766

Authors: Simona Grusea 

Publication date: 1 September 2010

Published in: Advances in Applied Mathematics (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.aam.2010.02.002

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zbMATH Keywords

exact distributionconserved genomic regionsdistance between permutationsgene order comparisonrandom uniform permutationreference region approachtransposition distance

Mathematics Subject Classification ID

Applications of statistics to biology and medical sciences; meta analysis (62P10) Biochemistry, molecular biology (92C40) Genetics and epigenetics (92D10)

Cites Work

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• Scan statistics
• A phase transition in the random transposition random walk
• On Hultman numbers
• Probabilities for a Generalized Birthday Problem
• Estimating the expected reversal distance after a fixed number of reversals
• Sorting permutations by block-interchanges
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• A simpler expression for Kth nearest neighbor coincidence probabilities

Cited In (2)

• `Genome order index' should not be used for defining compositional contraints in nucleotide sequences
• Comparative Genomics

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