Parallelization and optimization of Mfold on shared memory system

DOI10.1016/J.PARCO.2010.05.002MaRDI QIDQ991149zbMATH OpenOpenAlexFDO

Authors Qiankun Miao, Guangzhong Sun, Jiulong Shan, Guoliang Chen

Publication date 2 September 2010

Published in Parallel Computing (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/j.parco.2010.05.002

zbMATH Keywords

MfoldMPIoptimizationparallelizationRNA secondary structureshared memory system

Mathematics Subject Classification ID

Parallel algorithms in computer science (68W10)

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Cites work

• A high-performance, portable implementation of the MPI message passing interface standard

Cited in

(2)

• scientific article; zbMATH DE number 1595187 (Why is no real title available?)
• Computational Science – ICCS 2005

Describes a project that uses

Uses Software

• MPI/MPICH
• VTune
• NAS Parallel Benchmarks

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