Simulation of -phage DNA in microchannels using dissipative particle dynamics

MaRDI QIDQ992089zbMATHFDO

Authors Vasileios Symeonidis, George Em Karniadakis, Bruce Caswell

Publication date 10 September 2010

Published in Bulletin of the Polish Academy of Sciences. Technical Sciences (Search for Journal in Brave)

Full work available at URL http://bulletin.pan.pl/(53-4)395.html

zbMATH Keywords

dissipative particle dynamics (DPD)microchannels\(\lambda\)-phage DNA

Mathematics Subject Classification ID

Biochemistry, molecular biology (92C40) Computational methods for problems pertaining to biology (92-08) Biophysics (92C05)

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(10)

• A family of time-staggered schemes for integrating hybrid DPD models for polymers: Algorithms and applications
• Consistent model reduction of polymer chains in solution in dissipative particle dynamics: model description
• Flexible dissipative particle dynamics
• Static and dynamic properties of smoothed dissipative particle dynamics
• Simulating flow of DNA suspension using dissipative particle dynamics
• Dissipative particle dynamics simulation of cell entry into a micro-channel
• Dissipative particle dynamics: foundation, evolution, implementation, and applications
• A smooth dissipative particle dynamics method for domains with arbitrary-geometry solid boundaries
• On the Hydrodynamic Diffusion of Rigid Particles of Arbitrary Shape with Application to DNA
• Dissipative particle dynamics (DPD): an overview and recent developments

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