Finding pathway structures in protein interaction networks

DOI10.1007/S00453-007-0155-7zbMATH Open1127.68115OpenAlexW2057160277MaRDI QIDQ995774FDOQ995774

Authors: Songjian Lu, Fenghui Zhang, Sing-Hoi Sze, Jianer Chen 

Publication date: 10 September 2007

Published in: Algorithmica (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1007/s00453-007-0155-7

Recommendations

• Research in Computational Molecular Biology
• Finding supported paths in heterogeneous networks
• Pattern Matching in Protein-Protein Interaction Graphs
• Finding paths of length \(k\) in \(O^{*}(2^k)\) time
• An efficient algorithm for discovering probability motifs in biological networks

zbMATH Keywords

DIP database

Mathematics Subject Classification ID

Biochemistry, molecular biology (92C40) Analysis of algorithms (68W40) Nonnumerical algorithms (68W05)

Cited In (9)

• Identifying Functional Families of Trajectories in Biological Pathways by Soft Clustering: Application to TGF- $$\beta $$ Signaling
• Research in Computational Molecular Biology
• Finding supported paths in heterogeneous networks
• Bioinformatics in protein kinases regulatory network and drug discovery
• Computing shortest hyperpaths for pathway inference in cellular reaction networks
• Data Integration in the Life Sciences
• Research in Computational Molecular Biology
• Applications of domain-domain interactions in pathway study
• Enumerating dominant pathways in biological networks by information flow analysis

This page was built for publication: Finding pathway structures in protein interaction networks

Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q995774)