RcppPlanc

MaRDI QIDQ7371386CRANFDO

Authors Andrew Robbins, Yichen Wang

Last update 9 September 2026

Copyright license GNU General Public License, version 2.0, GNU General Public License, version 3.0

Software version identifier PACKAGES.rds, 2.0.0, 2.0.3, 2.0.4, 2.0.5, 2.0.6, 2.0.7, 2.0.8, 2.0.9, 2.0.10, 2.0.11, 2.0.12, 2.0.13, 2.0.14, 2.0.15, 2.0.16

Description

'Rcpp' bindings for 'PLANC', a highly parallel and extensible NMF/NTF (Non-negative Matrix/Tensor Factorization) library. Wraps algorithms described in Kannan et. al (2018) <doi:10.1109/TKDE.2017.2767592> and Eswar et. al (2021) <doi:10.1145/3432185>. Implements algorithms described in Welch et al. (2019) <doi:10.1016/j.cell.2019.05.006>, Gao et al. (2021) <doi:10.1038/s41587-021-00867-x>, and Kriebel & Welch (2022) <doi:10.1038/s41467-022-28431-4>.

Cites work

• Iterative single-cell multi-omic integration using online learning
• MPI-FAUN: An MPI-Based Framework for Alternating-Updating Nonnegative Matrix Factorization
• PLANC
• Single-Cell Multi-omic Integration Compares and Contrasts Features of Brain Cell Identity
• UINMF performs mosaic integration of single-cell multi-omic datasets using nonnegative matrix factorization

Cited in

(1)

• rliger

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