SMASH

Last update 27 February 2025

Copyright license GNU General Public License

Description

Cluster user-supplied somatic read counts with corresponding allele-specific copy number and tumor purity to infer feasible underlying intra-tumor heterogeneity in terms of number of subclones, multiplicity, and allocation (Little et al. (2019) <doi:10.1186/s13073-019-0643-9>).

Cites work

Associating somatic mutations to clinical outcomes: a pan-cancer study of survival time

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