qgg

Statistical Tools for Quantitative Genetic Analyses

Peter Soerensen, Palle Duun Rohde, Izel Fourie Soerensen

Last update: 7 September 2023

Software version identifier: 1.1.1, 1.0.0, 1.0.1, 1.0.2, 1.0.3, 1.0.4, 1.1.0, 1.1.2

Copyright license: GNU General Public License, version 3.0

Provides an infrastructure for efficient processing of large-scale genetic and phenotypic data including core functions for: 1) fitting linear mixed models, 2) constructing marker-based genomic relationship matrices, 3) estimating genetic parameters (heritability and correlation), 4) performing genomic prediction and genetic risk profiling, and 5) single or multi-marker association analyses. Rohde et al. (2019) <doi:10.1101/503631>.

Cites work

qgg: an R package for large-scale quantitative genetic analyses