localScore

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LocalScore



CRANlocalScoreMaRDI QIDQ108493FDOQ108493

Package for Sequence Analysis by Local Score

Sabine Mercier, Sebastian Simon, David Robelin, Sebastien Dejean

Last update: 2 November 2023

Copyright license: GNU General Public License, version 3.0, GNU General Public License, version 2.0, File License

Software version identifier: 1.0.8, 1.0.4, 1.0.5, 1.0.6, 1.0.10, 1.0.11

Functionalities for calculating the local score and calculating statistical relevance (p-value) to find a local Score in a sequence of given distribution (S. Mercier and J.-J. Daudin (2001) <https://hal.science/hal-00714174/>) ; S. Karlin and S. Altschul (1990) <https://www.ncbi.nlm.nih.gov/pmc/articles/PMC53667/>  ; S. Mercier, D. Cellier and F. Charlot (2003) <https://hal.science/hal-00937529v1/> ; A. Lagnoux, S. Mercier and P. Valois (2017) <doi:10.1093/bioinformatics/btw699> ).





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