junctions

CRANjunctionsMaRDI QIDQ114180FDOQ114180

The Breakdown of Genomic Ancestry Blocks in Hybrid Lineages

Thijs Janzen

Last update: 13 February 2024

Copyright license: GNU General Public License, version 3.0, GNU General Public License, version 2.0

Software version identifier: 2.0.3, 1.0.1, 1.0, 1.1.1, 1.1, 2.0.1, 2.1.0

Description

Individual based simulations of hybridizing populations, where the accumulation of junctions is tracked. Furthermore, mathematical equations are provided to verify simulation outcomes. Both simulations and mathematical equations are based on Janzen (2018, <doi:10.1101/058107>) and Janzen (2020, <doi:10.1101/2020.09.10.292441>).

Cites work

• Haplotype block dynamics in hybrid populations
• Estimating the time since admixture from phased and unphased molecular data

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